PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AA53G00422
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Aethionemeae; Aethionema
Family bZIP
Protein Properties Length: 137aa    MW: 16029.2 Da    PI: 7.6848
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AA53G00422genomeVEGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_138.42.7e-124591551
                CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkelee 51
                ++ +r ++NRe+A+rsR+RKk+ +eeL+++   L+ eN++Lk+ l++
  AA53G00422 45 RKRKRTISNRESAKRSRLRKKKHLEELTDELNRLSLENRELKNHLSN 91
                577999************************************87765 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.6E-113890No hitNo description
SMARTSM003385.0E-1040105IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.7144392IPR004827Basic-leucine zipper domain
PfamPF001709.3E-104591IPR004827Basic-leucine zipper domain
SuperFamilySSF579596.11E-104591No hitNo description
CDDcd147022.36E-134693No hitNo description
PROSITE patternPS0003604863IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 137 aa     Download sequence    Send to blast
MSTKLEPDSE ITGDEISEIL AFLQSGESEI GPIDTNRMVE PVDERKRKRT ISNRESAKRS  60
RLRKKKHLEE LTDELNRLSL ENRELKNHLS NVLYNGNVIS KENNRLETES VYLEFKLVEL  120
YRVLVAMQSS ISMRFKF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14665RKRTISNRESAKRSRLRKKK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009113297.14e-46PREDICTED: ocs element-binding factor 1
TrEMBLA0A078JKB84e-46A0A078JKB8_BRANA; BnaAnng23880D protein
TrEMBLM4EGE14e-46M4EGE1_BRARP; Uncharacterized protein
STRINGBra027855.1-P1e-45(Brassica rapa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM122322432
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59530.11e-37basic leucine-zipper 4